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Identification of bacterial pathogens and determination of their antibacterial resistance profiles in some cultured fish in Turkey


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1. Aoki T.: Present and future problems concerning the development of resistance in aquaculture. In: Chemotherapy in aquaculture: from theory to reality. Edited by Michel C. and Alderman D. Office International des Epizooties, Paris, 1992, pp. 254–262.Search in Google Scholar

2. Arthur M., Autissier D., Courvalin P.: Analysis of the nucleotide sequence of the ereB gene encoding the erythromycin esterase type II. Nucleic Acids Res 1986, 14, 4987–4999.10.1093/nar/14.12.4987Search in Google Scholar

3. Austin B., Austin D.A.: Bacterial Fish Pathogens Disease in Farmed and Wild Fish, Praxis Publishing, Chichester, UK, 2007, p. 533.Search in Google Scholar

4. Balta F., Sandalli C., Kayis S., Ozgumus O.B.: Molecular analysis of antimicrobial resistance in Yersinia ruckeri strains isolated from rainbow trout (Oncorhynchus mykiss) grown in commercial fish farms in Turkey. Bull Eur Assoc Fish Path 2010, 30, 211–219.Search in Google Scholar

5. Boran H., Terzi E., Altinok I., Capkin E., Bascinar N.: Bacterial diseases of cultured Mediterranean horse mackerel (Trachurus mediterraneus) in sea cages. Aquaculture 2013, 8, 396–399.10.1016/j.aquaculture.2013.02.025Search in Google Scholar

6. Capkin E., Terzi E., Altinok I.: Occurrence of antibiotic resistance genes in culturable bacteria isolated from Turkish trout farms and their local aquatic environment. Dis Aquat Org 2015, 114, 127–137.10.3354/dao02852Search in Google Scholar

7. CLSI.: Performance standards for antimicrobial susceptibility testing; Twenty-first Informational Supplement, M100-S21, 2011, 31, 1.Search in Google Scholar

8. Hall T.A.: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT, Nucl Acids Symp Ser 1999, 41, 95–98.Search in Google Scholar

9. Kayis S., Capkin E., Balta F., Altinok I.: Bacteria in rainbow trout (Oncorhynchus mykiss) in the southern Black Sea Region of Turkey - A survey. Isr J Aquacult-Bamid 2009, 61, 339–344.10.46989/001c.20564Search in Google Scholar

10. Kerrn M.B., Klemmensen T.F., Moller N., Espersen F.: Susceptibility of Danish Escherichia coli strains isolated from urinary tract infections and bacteraemia, and distribution of sul genes conferring sulphonamide resistance. J Antimicrob Chemother 2002, 50, 513–516.10.1093/jac/dkf164Search in Google Scholar

11. Krumperman P.H.: Multiple antibiotic resistance indexin of Escherichia coli to identify high-risk sources of fecal contamination of foods. Appl Environ Microbiol 1983, 46, 165–170.10.1128/aem.46.1.165-170.1983Search in Google Scholar

12. Kusuda R., Kawai K.: Bacterial diseases of cultured marine fish in Japan. Fish Pathol 1998, 33, 221–227.10.3147/jsfp.33.221Search in Google Scholar

13. Levy S.B., Marshall B.: Antibacterial resistance worldwide: causes, challenges and responses. Nat Med 2004, 10, 122−129.10.1038/nm1145Search in Google Scholar

14. Li J., Yie J., Foo R.W.T., Ling J.M.L., Xu H., Woo N.Y.S.: Antibiotic resistance and plasmid profiles of Vibrio isolates from cultured silver sea bream, Sparus sarpa. Mar Pollut Bull 1999, 39, 245–249.10.1016/S0025-326X(99)00062-4Search in Google Scholar

15. Marchesi J.: Design and evaluation of useful bacterium-specific PCR primers that amplify genes coding for bacterial 16S rRNA. Appl Environ Microbiol 1998, 64, 795–799.10.1128/AEM.64.2.795-799.19981061239464425Search in Google Scholar

16. Ng L.K., Martin I., Alfa M., Mulvey M.: Multiplex PCR for the detection of tetracycline resistant genes. Mol Cell Probe 2001, 15, 209–215.10.1006/mcpr.2001.0363Search in Google Scholar

17. Olesen I., Hasman H., Aarestrup F.M.: Prevalence of β-lactamases among ampicillin-resistant Escherichia coli and Salmonella isolated from food animals in Denmark. Microb Drug Resist 2004, 10, 334–340.10.1089/mdr.2004.10.334Search in Google Scholar

18. Ounissi H., Courvalin P.: Nucleotide sequence of the gene ereA encoding the erythromycin esterase in Escherichia coli. Gene 1985, 35, 271–278.10.1016/0378-1119(85)90005-8Search in Google Scholar

19. Oztürk R.C., Altinok I.: Bacterial and viral fish diseases in Turkey. Turk J Fish Aquat Sc 2014, 14, 275–297.10.4194/1303-2712-v14_1_30Search in Google Scholar

20. Schmidt A.S., Bruun M.S., Larsen J.L., Dalsgaard I.: Characterization of class 1 integrons associated with R-plasmids in clinical Aeromonas salmonicida isolates from various geographical areas. J Antimicrob Chemother 2001, 47, 735–743.10.1093/jac/47.6.73511389105Search in Google Scholar

21. Schwartz T., Kohnen W., Jansen B., Obst U.: Detection of antibiotic-resistant bacteria and their resistance genes in waste water, surface water, and drinking water biofilms. FEMS Microbiol Ecol 2003, 43, 325–335.10.1111/j.1574-6941.2003.tb01073.x19719664Search in Google Scholar

22. Su H.C., Ying G.G., Tao R., Zhang R.Q., Fogarty L.R.: Occurrence of antibiotic resistance and characterization of resistance genes and integrons in Enterobacteriaceae isolated from integrated fish Farms in South China, J Environ Monit 2011, 13, 3229–3236.10.1039/c1em10634a21975604Search in Google Scholar

23. Toranzo A.E., Magarinos B., Romalde J.L.: A review of the main bacterial fish diseases in mariculture systems. Aquaculture 2005, 246, 37–61.10.1016/j.aquaculture.2005.01.002Search in Google Scholar

24. TUIK.: Turkish Statistical Institute, http://www.turkstat.gov.tr/Start.do, 2014, Access date: 04.06.2015.Search in Google Scholar

25. Ture M., Boran H.: Phenotypic and genotypic antimicrobial resistance of Lactococcus sp. strains isolated from rainbow trout (Oncorhynchus mykiss). Bull Vet Inst Pulawy 2015, 59, 37–42.10.1515/bvip-2015-0006Search in Google Scholar

26. Van T.T.H., Chin J., Chapman T., Tran L.T., Coloe P.J.: Safety of raw meat and shellfish in Vietnam: an analysis of Escherichia coli isolations for antibiotic resistance and virulence genes. Int J Food Microbiol 2008, 124, 217–223.10.1016/j.ijfoodmicro.2008.03.02918457892Search in Google Scholar

27. Zhang X.X., Zhang T., Fang H.H.P.: Antibiotic resistance genes in water environment. Appl Microbiol Biotechnol 2009, 82, 397−414.10.1007/s00253-008-1829-z19130050Search in Google Scholar

eISSN:
2450-8608
Language:
English
Publication timeframe:
4 times per year
Journal Subjects:
Life Sciences, Molecular Biology, Microbiology and Virology, other, Medicine, Veterinary Medicine