[CARDOSO, M. M. and P. A. LOBO (2001): Delimitação de pisos bioclimáticos e regiões de proveniência de pinheiro manso em Portugal, usando sistemas de informação geográfica, Silva Lusitana 9: 93-108.]Search in Google Scholar
[CARNEIRO, A. I. L. N. (2002): Avaliação da variabilidade e controlo genético de características biométricas das pinhas e da semente da Pinus pinea L., Relatório do trabalho de fim de Curso de Engenharia Florestal, Universidade Técnica de Lisboa. Instituto Superior de Agronomia, Lisbon, 58 p.]Search in Google Scholar
[ELLIS, T. H. N., S. J. POYSER, M. R. KNOX, A. V. VERSHININ and M. J. AMBROSE (1998): Polymorphism of insertions sites of TY1-copia-class retrotransposon and its use for linkage and diversity analysis in pea, Molecular General Genetics 260: 9-19.10.1007/PL00008630]Search in Google Scholar
[EVARISTO, I. N., R. SEABRA, J. BAETA and M. S. PAIS (2002): Caracterização molecular de proveniências de Pinus pinea L. por RAPD (Random Amplified Polymorphic DNA), Silva Lusitana 10: 53-61.]Search in Google Scholar
[FALLOUR, D., B. FADY and F. LEFEVRE (1997): Study on isozyme variation in Pinus pinea L.: Evidence for low polymorphism, Silvae Genetica 46: 201-207.]Search in Google Scholar
[FELSENSTEIN, J. (2004): PHYLIP (Phylogeny Inference Package). Distributed by the author, Department of Genetics, University of Washington, Seattle.]Search in Google Scholar
[GÓMEZ, A. (1998): Variabilidade genética de Pinus halepensis en España mediante el uso de marcadores de ADN: RAPDs e Cp-microsatélites, PhD thesis, Universidad Politécnica de Madrid, Madrid, 162 p.]Search in Google Scholar
[GÓMEZ, A., E. AGUIRIANO, R. ALIÁ and M. A. BUENO (2002): Análisis de los recursos genéticos de Pinus pinea L. en España mediante microsatélites de cloroplasto, Investigación Agraria: Sistemas y Recursos Forestales 11: 145-154.]Search in Google Scholar
[HAMRICK, J., M. GODT and S. SHERMAN-BROYLES (1992): Factors influencing levels of genetic diversity in woody plant species, New Forests 6: 95-124.10.1007/BF00120641]Open DOISearch in Google Scholar
[KREMER, A. and S. MARIETTE (2003): Molecular markers in population genetics. In: DE VIENNE, D. (ed. Molecular Markers in Plant Genetics and Biotechnology, pp. 126-149. Science Publishers, Inc., New York.]Search in Google Scholar
[KUMAR, A. (1996): The adventures of Ty1-copia group of retrotransposons in plants, Trends in Genetics 12, 41-43.10.1016/0168-9525(96)81393-X]Search in Google Scholar
[KUMAR, A. and H. HIROCHIKA (2001): Application of retrotransposons as genetic tools in plant biology, Trends in Plant Sciences 6: 127-113.10.1016/S1360-1385(00)01860-4]Search in Google Scholar
[KUMAR, A., S. R. PEARCE, K. MCLEAN, G. Harrison, J. S. HESLOP-HARRISON, R. WAUGH and A. J. FAVELL (1997): The Ty1-copia group of retrotransposons in plants: genomic organisation, evolution, and use as molecular markers, Genetica 100: 205-217.10.1007/978-94-011-4898-6_21]Search in Google Scholar
[KUMAR, S. and A. RZHETSKY (1996): Evolutionary relationships of eukaryotic kingdoms, Journal of Molecular Evolution 42: 183-193.10.1007/BF02198844]Open DOISearch in Google Scholar
[LEDIG, F. T. (1992): Human impacts on genetic diversity in forest ecosystems, Oikos 63: 87-108.10.2307/3545518]Search in Google Scholar
[LYNCH, M. and B. G. MILLIGAN (1994): Analysis of population genetic structure with RAPD markers, Molecular Ecology 3: 91-99.10.1111/j.1365-294X.1994.tb00109.x]Open DOISearch in Google Scholar
[MANTEL, N. A. (1967): The detection of disease clustering and a generalized regression approach, Cancer Research 27: 209-220.]Search in Google Scholar
[MARIETTE, S., D. CHAGNE, C. LEZIER, P. PASTUSZKA, A. RAFFIN, C. PLOMION, and A. KREMER (2001): Genetic diversity within and among Pinus pinaster populations: comparison between AFLP and microsatellite markers, Heredity 86: 469-479.10.1046/j.1365-2540.2001.00852.x]Open DOISearch in Google Scholar
[MARIETTE, S., V. LE CORRE, F. AUSTERLITZ and A. KREMER (2002): Sampling within the genome for measuring within-population diversity: trade-offs between markers, Molecular Ecology 11: 1145-1156. MAY TAM, S., C. MHIRI, A. VOGELAAR, M. KERVELD, S. R. PEARCE and M. A. GRANDBASTIEN (2005): Comparative analyses of genetic diversities within tomato and pepper collections detected by retrotransposon-based SSAP, AFLP and SSR, Theoretical and Applied Genetics 110: 819-831.]Search in Google Scholar
[MIROV, N. T. (1967): The genus Pinus. The Ronald Press Company, New York, 602 p.]Search in Google Scholar
[MUELLER, U. G. and L. L. WOLFENBARGER (1999): AFLP genotyping and fingerprinting, Trends in Ecology and Evolution 14: 389-394.10.1016/S0169-5347(99)01659-6]Open DOISearch in Google Scholar
[MUTKE, S., J. GORDO and L. GIL (2000): The stone pine (Pinus pinea L.) breeding programme in Castile-Leon (Central Spain), FAO-CIHEAM NUCIS-Newsletter 9: 50-55.]Search in Google Scholar
[MYBURG, A. A. and D. L. REMINGTON (2000): Protocol for high throughput AFLP analysis using LI CORIR2 automated sequencer. In: NC State forest biotech AFLP protocol. North Carolina State University Forestry Department, Raleigh.]Search in Google Scholar
[NEI, M. (1987): Molecular evolutionary genetics Columbia University Press, New York, 512 p.10.7312/nei-92038]Search in Google Scholar
[NYBOM, H. (2004): Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants, Molecular Ecology 13: 1143-1155.10.1111/j.1365-294X.2004.02141.x15078452]Open DOISearch in Google Scholar
[PEARCE, S. R., G. HARRISON, D. LI, J. S. HESLOP-HARRISON, A. KUMAR and A. J. FLAVELL (1996): The Ty1-copia group retrotransposons in Vicia species: copy number, sequence heterogeneity and chromosomal localisation, Molecular General Genetics 250: 305-315.10.1007/BF021743888602145]Search in Google Scholar
[PEARCE, S. R., C. M. STUART-ROGERS, A. KUMAR, T. H. N. ELLIS and A. J. FLAVELL (1999): Rapid isolation of plant Ty1-copia group retrotransposon LTR sequences for molecular marker studies., Plant Journal 19: 711-717.10.1046/j.1365-313x.1999.00556.x10571856]Open DOISearch in Google Scholar
[PETIT, R. J., N. BAHMAN and P. BARADAT (1995): Comparison of genetic differentiation in maritime pine (Pinus pinaster Ait.) estimated using isozyme, total protein and terpenic loci, Heredity 75: 382-389.10.1038/hdy.1995.150]Open DOISearch in Google Scholar
[QUEEN, R. A., B. M. GRIBBON, C. JAMES, P. JACK and A. J. FLAVELL (2004): Retrotransposon-based molecular markers for linkage and genetic diversity analysis in wheat, Molecular Genetics and Genomics 271: 91-97.10.1007/s00438-003-0960-x14652738]Search in Google Scholar
[QUEZÉL, P. (1980): Biogéographie et écologie des conifères sur le pourtour méditerranéen. In: Actualités d’ecologie forestière. Sol, flore, faune PESSON, P. (ed.), pp. 205-255. Gauthiers-Villars, Paris.]Search in Google Scholar
[RIBEIRO, M. M., C., PLOMION, R. PETIT, G. G.VENDRAMIN and A. E. SZMIDT (2001): Variation of chloroplast simplesequence repeats in Portuguese maritime pine (Pinus pinaster Ait.), Theoretical and Applied Genetics 102: 97-103.10.1007/s001220051623]Open DOISearch in Google Scholar
[ROCHETA, M., J. CORDEIRO, M. OLIVEIRA and C. MIGUEL (2006): PpRT1 (Pinus pinaster retrotransposon 1): the first gypsy-like retrotransposon isolated in Pinus pinaster, Planta 225: 551-562.10.1007/s00425-006-0370-517008993]Search in Google Scholar
[ROHLF, F. J. (1993): NTSYSpc: Numerical Taxonomy and Multivariate Analysis System (V 2.1.) Exeter Publisher, New York p.]Search in Google Scholar
[SALVADOR, L., R. ALÍA, D. AGÚNDEZ and L. GIL, (2000): Genetic variation and migration pathways of maritime pine (Pinus pinaster Ait.) in the Iberian Peninsula, Theoretical and Applied Genetics 100: 89-95.10.1007/s001220050013]Open DOISearch in Google Scholar
[SCHULMAN, A. H., A. J. FLAVELL and N. T. H. ELLIS (2004): The application of LTR retrotransposons as molecular markers in plants. In: MILLER, W. J., CAPY, P. (eds). Mobile genetic elements protocols and genomic applications, pp. 145-158. Humana Press Inc., Totowa.10.1385/1-59259-755-6:145]Search in Google Scholar
[SOKAL, R. R. and F. J. ROHLF (1995): Biometry, 3rd ed. edn. W. H. FREEMAN and Co., San Francisco, 887 p.]Search in Google Scholar
[STEVENSON, A. C. (1985): Studies in the vegetational history of SW Spain. II. Palynological investigations at Laguna de Las Madres, SW Spain, Journal of Biogeography 12: 293-314.10.2307/2844863]Open DOISearch in Google Scholar
[SYED, N. H., M. J. SURESHSUNDAR, B. S. Bhau, J. J. V. CAVALCANTI and A. J. FLAVELL (2005): Ty1-copia retrotransposon- based SSAP marker development in cashew (Anacardium occidentale L.), Theoretical and Applied Genetics 110: 1195-1202.10.1007/s00122-005-1948-115761718]Search in Google Scholar
[VEKEMANS, X., T. BEAUWENS, M. LEMAIRE and I. ROLDANRUIZ (2002): Data from amplified fragment polymorphism (AFLP) markers show indication of size homoplasy and of a relationship between degree of homoplasy and fragment size, Molecular Ecology 11: 139-151.10.1046/j.0962-1083.2001.01415.x11903911]Open DOISearch in Google Scholar
[VENDRAMIN, G. G., M. ANZIDEI, A. MADAGHIELE and G. BUCCI (1998): Distribution of genetic diversity in Pinus pinaster Ait. as revealed by chloroplast microsatellites, Theoretical and Applied Genetics 97: 456-463.10.1007/s001220050917]Open DOISearch in Google Scholar
[VOS, P., R. HOGERS, M. BLEEKER, M. REIJANS, T. VANDELEE, M. HOMES, A. FRIJTERS, J. POT, J. PELEMAN, M. KUIPER and M. ZABEAU (1995): AFLP: A new technique for DNA fingerprinting, Nucleic Acids Research 23: 4407-4414.10.1093/nar/23.21.44073073977501463]Open DOISearch in Google Scholar
[WAUGH, R., K. MCLEAN, A. J. FLAVELL, S. R. PEARCE, A. KUMAR, B. B. T. THOMAS and W. POWELL (1997): Genetic distribution of Bare-1-like retrotransposable elements in barley genome revealed by sequence specific amplification polymorphisms (SSAP), Molecular General Genetics 253: 687-694.10.1007/s0043800503729079879]Search in Google Scholar
[YU, G. X. and R. P. WISE (2000): An anchored AFLP- and retrotransposon-based map of diploid Avena., Genome Research 43: 736-749.10.1139/g00-037]Open DOISearch in Google Scholar
[ZHIVOTOVSKY, L. A. (1999): Estimating population structure in diploids with multilocus dominant DNA markers, Molecular Ecology 8: 907-913.10.1046/j.1365-294x.1999.00620.x10434412]Search in Google Scholar