Open Access

An automatic segmentation method for scanned images of wheat root systems with dark discolourations

International Journal of Applied Mathematics and Computer Science's Cover Image
International Journal of Applied Mathematics and Computer Science
Robot Control Theory (special section, pp. 519 - 588), Cezary Zieliński (Ed.)

Cite

Bernsen, J. 1986). Dynamic thresholding of grey-level images, Proceedings of the 8th International Conference on Pattern Recognition, Paris, France, pp. 1251-1255.Search in Google Scholar

Bezdek, J. C. (1981). Pattern Recognition with Fuzzy Objective Function Algorithms, Plenum Press, New York, NY.10.1007/978-1-4757-0450-1Search in Google Scholar

Glasbey, C. A. and Horgan, G. W. (1995). Image Analysis for the Biological Sciences, John Wiley & Sons, Inc., New York, NY.Search in Google Scholar

Gonzalez, E. R., Woods, R. E. and Eddins S. L. (2004). Digital Image Processing Using MATLAB, Prentice Hall, Upper Saddle River, NJ.Search in Google Scholar

Gonzalez, R. C. and Woods, R. C. (2008). Digital Image Processing, Prentice Hall, Upper Saddle River, NJ.Search in Google Scholar

Hasthorpe, J, and Mount, N. (2007). The generation of river channel skeletons from binary images using raster thinning algorithms http://ncg.nuim.ie/gisruk/materials/proceedings/PDF/P7.pdfSearch in Google Scholar

Horvath, J. (2006). Image segmentation using fuzzy c-means http://bmf.hu/conferences/sami2006/JurajHorvath.pdfSearch in Google Scholar

Jung, V., Olsson, E., Caspersen, S., Asp, H., Jensen, P. and Alsanius, B. W. (2004). Response of young hydroponically grown tomato plants to phenolic acids, Scientia Horticulturae 100(1-4): 23-37.10.1016/j.scienta.2003.08.011Search in Google Scholar

Lam, L., Lee, S-W. and Suen, C. Y. (1992). Thinning methodologies—A comprehensive survey, IEEE Transactions on Pattern Analysis and Machine Intelligence 14(9): 869-885.10.1109/34.161346Search in Google Scholar

Lambert, P. and Carron, T. (1999). Symbolic fusion of luminance-hue-chroma features for region segmentation, Pattern Recognition 32(11): 1857-1872.10.1016/S0031-3203(99)00010-2Search in Google Scholar

Mohamed, N. A., Ahmed, M. N. and Farag A. (1999). Modified fuzzy c-means in medical image segmentation, Proceeding of the IEEE International Conference on Acoustics, Speech, and Signal Processing, Phoenix, AZ, USA, Vol. 6, pp. 3429-3432.Search in Google Scholar

Nord, E. (2008). Other Uses for WinRhizo http://roots.psu.edu/en/node/36Search in Google Scholar

Otsu, N. (1979). A threshold selection method from grey-level histograms, IEEE Transactions on Systems, Man, and Cybernetics 9(1): 62-66.10.1109/TSMC.1979.4310076Search in Google Scholar

Regent Instruments Inc. (2008). WinRHIZO For root morphology and architecture measurement http://www.regent.qc.ca/products/rhizo/Rhizo.htmlSearch in Google Scholar

Seregin, I. V. and Kozhevnikova, A. D. (2009). Enhancement of nickel and lead accumulation and their toxic growthinhibitory effects on amaranth seedlings in the presence of calcium, Russian Journal of Plant Physiology 56(1): 80-84.10.1134/S1021443709010129Search in Google Scholar

Serra, J., (1986). Introduction to mathematical morphology, Computer Vision, Graphics and Image Processing 35(3): 283-305.10.1016/0734-189X(86)90002-2Search in Google Scholar

Smit, L. A., Bengough, A. G., Engels, C., Van Noordwijk, M., Pellerin, S. and Van de Geijn, S. C. (2000). Root Methods: A Handbook, Springer Verlag, Heidelberg.10.1007/978-3-662-04188-8Search in Google Scholar

Terry N., Zayed A.M., de Souza M.P. and Tarun A.S. (2000). Selenium in higher plants, Annual Review of Plant Physiology and Plant Molecular Biology 51: 401-432.10.1146/annurev.arplant.51.1.40115012198Search in Google Scholar

The Mathworks Inc. (2008a). Image Processing Toolbox User's Guidehttp://www.mathworks.com/products/matlab/Search in Google Scholar

The Mathworks Inc. (2008b). Fuzzy Logic Toolbox User's Guidehttp://www.mathworks.com/products/matlab/Search in Google Scholar

Vincent, L. and Soille, P. (1991). Watersheds in digital spaces: An efficient algorithm based on immersion simulations, IEEE Transactions on Pattern Analysis and Machine Intelligence 13(6): 583-598.10.1109/34.87344Search in Google Scholar

Zobel, R.W., Kinraide, T. B. and Baligar, V.C. (2007). Fine root diameters can change in response to changes in nutrient concentration, Plant and Soil 297(1-2): 243-254.10.1007/s11104-007-9341-2Search in Google Scholar

ISSN:
1641-876X
Language:
English
Publication timeframe:
4 times per year
Journal Subjects:
Mathematics, Applied Mathematics