Culture Based Evaluation of Microbiota in Children with Acute Appendicitis

Abdussemee, A., Oludolapo, A., Adeyinka, A., Olusegun, F. (2018). Bacterial pattern in acute appendicitis. Ann. Afr. Surg.,15 (1), 8–13.10.4314/aas.v15i1.3Search in Google Scholar

Anonymous (2013). Recommendations for preoperative antimicrobial prophylaxis. Recommendations for the use of antibacterial agents in surgical prophylaxis KS/MET-43-00/2013. Children’s Clinical University Clinic, pp. 9.Search in Google Scholar

Anonymous (2019). Clinical breakpoints and dosing of antibiotics. European Committee on Antimicrobial susceptibility testing. http://www.eucast.org/clinical_breakpoints/ (accessed 10 December 2019).Search in Google Scholar

Anonymous (2019). National Center for Biotechnology Information. PubChem Database. Avibactam, CID=9835049. https://pubchem.ncbi.nlm.nih.gov/compound/Avibactam (accessed 10 December 2019).Search in Google Scholar

Anonymous (2019). National Center for Biotechnology Information. PubChem Database.Amikacin,CID=37768. https://pubchem.ncbi.nlm.nih.gov/compound/Amikacin (accessed 12 December 2019).Search in Google Scholar

Anonymous (2019). The Drugbank. Ceftazidime. https://www.drugbank.ca/drugs/DB00438 (accessed 10 December 2019).Search in Google Scholar

Baldwin, C. M., Lyseng-Williamson, K. A., Keam, S. J. (2008). Meropenem: A review of its use in the treatment of serious bacterial infections. Drugs, 68 (6), 803–838.10.2165/00003495-200868060-00006Search in Google Scholar

Bazzaz, A., Lor, D., Mahdi, N. (2018). Impact of some antibiotics on bacteria isolated from appendices in Kirkuk Province, Iraq. Adv. Biosci. Biotechnol.,9, 1–10.10.4236/abb.2018.91001Search in Google Scholar

Bhangu, A., Søreide, K., Di Saverio, S., Assarsson, J. H., Drake, F. T. (2015). Acute appendicitis: Modern understanding of pathogenesis, diagnosis, and management. Lancet, 386 (10000), 1278–1287.10.1016/S0140-6736(15)00275-5Search in Google Scholar

Chen, C. Y., Chen, Y. C., Pu, H. N., Tsai, C. H., Chen, W. T., Lin, C. H. (2012). Bacteriology of acute appendicitis and its implication for the use of prophylactic antibiotics. Surg. Infect. (Larchmt),13 (6), 383–390.10.1089/sur.2011.13523231389Search in Google Scholar

Drusano, G. L., Neely, M. N., Yamada, W.M., Duncanson, B., Brown, D., Maynard, M., Vicchiarelli, M., Louie, A. (2018). The combination of fosfomycin plus meropenem is synergistic for Pseudomonas aeruginosa PAO1 in a hollow-fiber infection model. Antimicrob. Agents Chemother.,62 (12), e01682-18.10.1128/AAC.01682-18625676630249700Search in Google Scholar

Du, S.-J., Kuo, Cheng, C. H., Fei, A., Wei, H.-W., Chang, S.-K. (2010). Molecular mechanisms of ceftazidime resistance in Pseudomonas aeruginosa isolates from canine and human infections. Original Paper Veterin. Med.55, 172–182.10.17221/64/2010-VETMEDSearch in Google Scholar

Essenmacher, A. C., Nash, E., Walker, S. K., Pitcher, G. J., Buresh, C. T., Sato, T. S. (2018). Stump appendicitis. Clin. Pract. Cases Emerg. Med.,2 (3), 211–214.10.5811/cpcem.2018.3.37730607548030083635Search in Google Scholar

Feng, Y., Bakker, R. T., van Hest, R. M., Hodiamont, C. J., Brul, S., Schultsz, C., ter Kuile, B. H. (2017). Optimization of therapy against Pseudomonas aeruginosa with ceftazidime and meropenem using chemostats as model for infections, FEMS Microbiol. Lett., 364 (14), fnx142.10.1093/femsle/fnx142Search in Google Scholar

Fisher, J. F., Mobashery, S. (2014). The sentinel role of peptidoglycan recycling in the β-lactam resistance of the Gram-negative Enterobacteriaceae and Pseudomonas aeruginosa. Bioorg. Chem., 56, 41–48.10.1016/j.bioorg.2014.05.011416164424955547Search in Google Scholar

Gebbers, J. O., Laissue, J. A. (2004). Bacterial translocation in the normal human appendix parallels the development of the local immune system. Ann. NY Acad. Sci.,1029, 337–343.10.1196/annals.1309.01515681775Search in Google Scholar

Gracia, J., Gruenberg, K., Nguyen, L., MacDougall, C. (2018). Multidrug-resistant Pseudomonas aeruginosa Iinfections: Hard to treat, but hope on the horizon? Contagion Live – Infectious Diseases Today, received from ContagionLive, Database on the World Wide Web. https://www.contagionlive.com/publications/contagion/2018/february/multidrugresistant-pseudomonas-aeruginosa-infections-hard-to-treat-but-hope-on-the-horizon (accessed 10 December 2019).Search in Google Scholar

Guillet-Caruba, C., Cheikhelard, A., Guillet, M., Bille, E., Descamps, P., Yin, L., Khen-Dunlop, N., Zahar, J. R., Sarnacki, S., Revillon, Y., Berche, P., Ferroni, A. (2011). Bacteriologic epidemiology and empirical treatment of pediatric complicated appendicitis. Diagn. Microbiol. Infect. Dis., 69 (4), 376–381.10.1016/j.diagmicrobio.2010.11.00321396532Search in Google Scholar

Guinane, C. M., Tadrous, A., Fouhy, F., Ryan, C. A., Dempsey, E. M., Murphy, B., Andrews, E., Cotter, P. D., Stanton, C., Ross, R. P. (2013). Microbial composition of human appendices from patients following appendectomy. MBio., 4 (1), e00366-12.10.1128/mBio.00366-12355154523322636Search in Google Scholar

Jackson, H. T., Mongodin, E. F (2014). Culture-independent evaluation of appendix and rectum microbiomes in children with and without appendicitis. PLOS One, 9 (4), 1–9.10.1371/journal.pone.0095414399740524759879Search in Google Scholar

Kakars, M., Rekevica, A., Engelis, A., Petersons, A. (2017). An update of a single center review in the management of acute appendicitis in children. In: International Scientific Conference, 6–7 April 2017, Rīga, Latvia. Rīga Stradiņš University, Rīga, p. 59.Search in Google Scholar

Kos V. N., McLaughlin R. E., Gardner H. A. (2016). Elucidation of mechanisms of ceftazidime resistance among clinical isolates of Pseudomonas aeruginosa by using genomic data. Antimicrobial agents and chemotherapy, 60 (6), 3856–3861.10.1128/AAC.03113-15487935427067331Search in Google Scholar

Lamps, L. W. (2010). Infectious causes of appendicitis. Inf. Dis. Clin. North Amer., 24 (4), 995-1018-ix-x.10.1016/j.idc.2010.07.01220937462Search in Google Scholar

Loho, T., Sukartini, N., Astrawinata, D. A. W, Immanuel, S., Aulia, D., Priatni, I. (2018). In vitro antibacterial interaction of Doripenem and Amikacin against multidrug-resistant Acinetobacter baumannii, Pseudo-monas aeruginosa, and Klebsiella pneumoniae isolates. Can. J. Infect. Dis. Med. Microbiol. Article ID 1047670, 6 pages. https://doi.org/10.1155/2018/1047670.10.1155/2018/1047670605129430065794Search in Google Scholar

Mazuski, J. E., Gasink, L. B., Armstrong, J., Broadhurst, H., Stone, G. G., Rank, D., Llorens, L., Newell, P., Pachl, J. (2016). Efficacy and safety of ceftazidime-avibactam plus metronidazole versus meropenem in the treatment of complicated intra-abdominal infection: Results from a randomized, controlled, double-blind, phase 3 program. Clin. Infect. Dis., 62 (11), 1380–1389.10.1093/cid/ciw133487228926962078Search in Google Scholar

Naher, H. S., Ktab, F. K. (2013). Bacterial profile associated with appendicitis. Int. Res. J. Medical Sci., Vol. 1 (2), 1–4.Search in Google Scholar

Noha, A. H., Amany, H. I. M., Sahar,M. A. E., Hazem, A. W. A. R. (2015). High prevalence of multidrug resistant Pseudomonas aeruginosa recovered from infected burn wounds in children. Arch. Clin. Microbiol.,4 (4), 1–7.Search in Google Scholar

Ny, S., Kozlov, R., Dumpis, U., Edquist, P., Gröndahl-Yli-Hannuksela, K., Kling, A. N., Lis, D. O., Lübbert, C., Pomorska-Wesołowska, M., Palagin, I., Vilde, A., Vuopio, J., Walter, J., Wisell, K.T., Tegmark, K., NoDARS ESBL-carrier working group. (2018). Large variation in ESBL-producing Escherichia coli carriers in six European countries including Russia. Eur. J. Clin. Microbiol. Infect. Dis., 37, 2347–2354.10.1007/s10096-018-3382-830338465Search in Google Scholar

Parthiban, N., Harish, M. (2017). A study on microbiology culture of acute appendicectomy specimen and its correlation with wound infection. Int. Surg. J.,4, 2212–2215.10.18203/2349-2902.isj20172768Search in Google Scholar

Qin, X., Tran, B. G., Kim, M. J., Wang, L., Nguyen, D. A., Chen, Q., Song J., Laud, P. J., Stone, G. G. Chow, J. W. (2017). A randomised, double-blind, phase 3 study comparing the efficacy and safety of ceftazidime/avibactam plus metronidazole versus meropenem for complicated intra-abdominal infections in hospitalised adults in Asia. Int. J. Antimicrob. Agents, 49 (5), 579–588.10.1016/j.ijantimicag.2017.01.01028363526Search in Google Scholar

Rhee, K. J., Jasper, P. J., Sethupathi, P., Shanmugam, M., Lanning, D., Knight, K. L. (2005). Positive selection of the peripheral B cell repertoire in gut-associated lymphoid tissues. J. Exp. Med.,201 (1), 55–62.10.1084/jem.20041849221277015623575Search in Google Scholar

Rickard, J. (2018). Antibiotic use and antimicrobial resistance of surgical patients with peritonitis at a tertiary referral hospital in Rwanda. Surg. Infect.,19 (4), 382–387.10.1089/sur.2017.15829621001Search in Google Scholar

Roberts, J. P. (1988). Quantitative bacterial flora of acute appendicitis. Arch. Dis. Childhood, 63 (5), 536.10.1136/adc.63.5.53617789003389871Search in Google Scholar

Rogers, M. B., Brower-Sinning, R., Firek, B., Zhong, D., Morowitz, M. J. (2016). Acute appendicitis in children is associated with a local expansion of fusobacteria. Clin. Infect. Dis., 63 (1), 71–78.10.1093/cid/ciw20827056397Search in Google Scholar

Salö, M., Marungruang, N., Roth, B., Sundberg, T., Stenström, P., Arnbjörnsson, E., Fåk, F., Ohlsson, B. (2017). Evaluation of the microbiome in children’s appendicitis. Int. J. Colorectal Dis., 32 (1), 19–28.10.1007/s00384-016-2639-x521988327613729Search in Google Scholar

Schulin, S., Schlichting, N., Blod, C., Opitz, S., Suttkus, A., Stingu, C. S., Barry, K., Lacher, M., Bühligen, U., Mayer, S. (2017). The intra- and extraluminal appendiceal microbiome in pediatric patients. Medicine, 96, 52(e9518).10.1097/MD.0000000000009518639314829384958Search in Google Scholar

Snyder, M. J., Guthrie, M., Cagle, S. (2018). Acute appendicitis: Efficient diagnosis and management. Amer. Fam. Physician,98 (1), 25–33.Search in Google Scholar

Solomkin, J., Hershberger, E., Miller, B., Popejoy, M.., Friedland, I., Steenbergen, J., Yoon, M., Collins, S., Yuan,G., Barie, P. S., Eckmann, C. (2015). Ceftolozane/tazobactam plus metronidazole for complicated intra-abdominal infections in an era of multidrug resistance: results from a randomized, double-blind, phase 3 trial (ASPECT-cIAI). Clin. Infect. Dis., 60 (10), 1462–1471.10.1093/cid/civ097441219125670823Search in Google Scholar

Terentjeva, M., Streikiša, M., Avsejenko, J., Trofimova, J., Kovaļenko, K., Elferts, D., Bērziņš, A. (2019). Prevalence and antimicrobial resistance of Escherichia coli, Enterococcus spp. and the major foodborne pathogens in calves in Latvia. Foodborne Pathog. Dis., 16 (1), 35–41.10.1089/fpd.2018.2523Search in Google Scholar

Turel, O. Mirapoglu, S. Y., Yuksel, M., Ceylan, A., Gultepe, B. S. (2018). Perforated appendicitis in children: Antimicrobial susceptibility and antimicrobial stewardship. J. Global Antimicrob. Resist.,16, 159–161.10.1016/j.jgar.2018.09.015Search in Google Scholar

Wagenlehner, F. M., Umeh, O., Steenbergen, J., Yuan, G., Darouiche, R. O. (2015). Ceftolozane-tazobactam compared with levofloxacin in the treatment of complicated urinary tract infections, including pyelonephritis: A randomised, double-blind, phase 3 trial (ASPECT-cUTI). The Lancet, 385 (9981), 1949–1956.10.1016/S0140-6736(14)62220-0Search in Google Scholar

Xipell, M., Bodro, M., Marco, F., Losno, R. A., Cardozo, C., Soriano, A. (2017). Clinical experience with ceftazidime/avibactam in patients with severe infections, including meningitis and lung abscesses, caused by extensively drug-resistant Pseudomonas aeruginosa. Int. J. Antimicrob. Agents, 49 (2), 266–268.10.1016/j.ijantimicag.2016.11.00527979500Search in Google Scholar

Zhong, D., Brower-Sinning, R., Firek,B., Morowitz, M. J. (2014). Acute appendicitis in children is associated with an abundance of bacteria from the phylum Fusobacteria. J. Pediatr. Surg.,49 (3), 441–446.10.1016/j.jpedsurg.2013.06.02624650474Search in Google Scholar