Cite

Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. D., Seidman, J. G., Smith, J. A., Struhl, K. (eds.). Current Protocols in Molecular Biology. Vols. 1, 2, units 2, 3, 10, 13, 15, 16. Wiley, New York: 1990.Search in Google Scholar

Barnes, W. M. (1994). PCR amplification of up to 35-kb DNA with high fidelity and high yield from lambda bacteriophage templates. Proc. Natl. Acad. Sci. USA, 91 (6), 2216–2220.10.1073/pnas.91.6.2216Open DOISearch in Google Scholar

Brown, D. C. W., Thorpe, T. A. (1982). Mitochondrial activity during shoot formation and growth in tobacco callus. Physiol. Plant, 54 (2), 125–130.10.1111/j.1399-3054.1982.tb06314.xSearch in Google Scholar

Burch-Smith, T. M., Brunkard, J. O., Choi, Y. G., Zambryski, P. C. (2011). Organelle-nucleus cross-talk regulates plant intercellular communication via plasmodesmata. Proc. Natl. Acad. Sci. USA, 108 (51), e1451–1460.10.1073/pnas.1117226108Search in Google Scholar

Castandet, B., Araya, A. (2011). RNA editing in plant organelles. Why make it easy? Biochemistry (Moscow), 76 (8), 924–931.10.1134/S0006297911080086Search in Google Scholar

Chabregas, S. M., Luche, D. D., Van Sluys, M.-A., Menck, C. F. M., Silva-Filho, M. C. (2003). Differential usage of two in-frame translational start codons regulates subcellular localization of Arabidopsis thaliana THI1. J. Cell Sci.,116, 285–291.10.1242/jcs.00228Search in Google Scholar

Couvillion, M. T., Soto, I. C., Shipkovenska, G., Churchman, L.S. (2016). Synchronized mitochondrial and cytosolic translation programs. Nature, 533 (7604), 499–503.10.1038/nature18015Search in Google Scholar

Godoi, P. H., Galhardo, R. S., Luche, D. D., Van Sluys, M. A., Menck, C. F., Oliva, G. (2006). Structure of the thiazole biosynthetic enzyme THI1 from Arabidopsis thaliana. J. Biol. Chem., 281 (41), 30957–30966.10.1074/jbc.M604469200Search in Google Scholar

Golemis, E. A., Serebriiskii, I., Finley, R. L., Jr., Kolonin, M. G., Gyuris, J., Brent, R. (2009). Interaction trap/two hybrid system to identify interacting proteins. In: Current Protocols in Protein Science. Wiley, New York, Suppl. 57, pp. 19.2.1–19.2.35.10.1002/0471140864.ps1902s57Search in Google Scholar

Edwards, D. (Ed.). (2007). Plant Bioinformatics (Methods and Protocols). Edwards, D. (Ed.). Humana Press, Totowa, New Jersey. 552 pp.Search in Google Scholar

Grinberg, A. V., Hannemann, F., Schiffler, B., Müller, J., Heinemann, U., Bernhardt, R. (2000). Adrenodoxin: Structure, stability, and electron transfer properties. Proteins,40, 590–612.10.1002/1097-0134(20000901)40:4<590::AID-PROT50>3.0.CO;2-PSearch in Google Scholar

Gyuris, J., Golemis, E. A., Chertkov, H., Brent, R. (1993). Cdi1, a human G1 and S phase protein phosphatase that associates with Cdk2. Cell, 75 (4), 791–803.824275010.1016/0092-8674(93)90498-FSearch in Google Scholar

Haag, S., Schindler, M., Berndt, L., Brennicke, A., Takenaka, M., Weber, G. (2017). Crystal structures of the Arabidopsis thaliana organellar RNA editing factors MORF1 and MORF9. Nucleic Acids Res., 45 (8), 4915–4928.10.1093/nar/gkx099Search in Google Scholar

Kartel, N. A., Shpakovski, G. V., Spivak, S. G., Brichkova, G. G., Yarmolinsky, D. G., Berdichevets, I. N., Maneshina, T. V. Recombinant plasmid pGBP450f to obtain transgenic plants and a method of producing transgenic plants with improved productivity and resistance to fungal phytopathogens [Картель, H. A., Шпаковский, Г. В., Спивак, С. Г., Бричкова, Г. Г., Ярмолинский, Д. Г., Бердичевец, И. H., Манешина, Т. В. Рекомбинантная плазмида pGBP450f для получения трансгенных растений и способ получения трансгенных растений табака с повышенной продуктивностью и устойчивостью к грибным фитопатогенам]. Patent of the Russian Federation No. 2237717 [Патент Российской Федерации № 2237717]. Priority from 20.12.2002. Issued 10.10.2004. Bulletin of Inventions, No. 10.Search in Google Scholar

Kartel, N. A., Spivak, S. G., Shpakovski, G. V., Maneshina, T. V., Brichkova, G. G., Yarmolinsky, D. G., Berdichevets, I. N. Genetic engineering construction expressing cDNA of CYP11A1 gene of animal origin in plants, and a method for producing transgenic plants with increased yield and resistance to phytopathogens [Картель, H. A., Спивак, С. Г., Шпаковский, Г. В., Манешина, Т. В., Бричкова, Г. Г., Ярмолинский, Д. Г., Бердичевец, И. H. Генно-инженерная конструкция, экспрессирующая кДНК гена CYP11A1 животного происхождения в растениях, и метод получения трансгенных растений с повышенной урожайностью и устойчивостью к фитопатогенам]. Patent of the Republic of Belarus No. 9201 [Патент Республики Беларусь № 9201]. Priority from 30.12.2002. Issued 25.01.2007.Search in Google Scholar

Luzikov, V. N., Novikova, L. A., Spiridonova, V. A., Isaeva, L. V., Whelan, J., Hugosson, M., Glazer, E. (1994). Design of heterologous mitochondria: Import of cattle cytochrome P-450scc precursor into plant mitochondria. Biochemistry (Moscow), 59 (7), 1098–1101.Search in Google Scholar

Murashige, T., Skoog, F. A. (1962). A revised medium for rapid growth and bioassays with tobacco tissue culture. Physiol. Plant., 15 (3), 473–497.10.1111/j.1399-3054.1962.tb08052.xSearch in Google Scholar

Ng, S., Ivanova, A., Duncan, O., Law, S. R., Van Aken, O., De Clercq, I., Wang, Y., Carrie, C., Xu, L., Kmiec, B., Walker, H., Van Breusegem, F., Whelan, J., Giraud, E. (2013) A membrane-bound NAC transcription factor, ANAC017, mediates mitochondrial retrograde signaling in Arabidopsis. Plant Cell., 25 (9), 3450–3471.10.1105/tpc.113.113985Open DOISearch in Google Scholar

Ohta, D., Mizutani, M. (2004). Redundancy or flexibility: Molecular diversity of the electron transfer components for P450 monooxygenases in higher plants. Front. Biosci.,9, 1587–1597.10.2741/135614977570Search in Google Scholar

Picciocchi, A., Douce, R., Alban, C. (2001) Biochemical characterization of the Arabidopsis biotin synthase reaction. The importance of mitochondria in biotin synthesis. Plant Physiol., 127 (3), 1224–1233.10.1104/pp.010346Search in Google Scholar

Picciocchi, A., Douce, R., Alban C. (2003) The plant biotin synthase reaction. Identification and characterization of essential mitochondrial accessory protein components. J. Biol. Chem., 278 (27), 24966–24975.10.1074/jbc.M30215420012714594Search in Google Scholar

Proshkin, S. A., Shematorova, E. K., Suslova, E. A., Proshkina, G. M., Shpakovski, G. V. A minor isoform of the human RNA polymerase II subunit hRPB11 (POLR2J) interacts with several components of the translation initiation factor eIF3. (2011) Biochemistry (Moscow), 76 (8), 976–980.10.1134/S000629791108014122022972Search in Google Scholar

Randau, L., Stanley, B. J., Kohlway, A., Mechta, S., Xiong, Y., Söll, D. (2009). A cytidine deaminase edits C to U in transfer RNAs in Archaea. Science, 324 (5927), 657–659.10.1126/science.1170123Search in Google Scholar

Ruden, D., M., Ma, J., Li, Y., Wood, K., Ptashne, M. (1991). Generating yeast transcriptional activators containing no yeast protein sequences. Nature, 350 (6315), 250–252.10.1038/350250a0Search in Google Scholar

Salvato, F., Havelund, J. F., Chen, M., Rao, R. S. P., Rogowska-Wrzesinska, A., Jensen, O. N., Gang, D. R., Thelen, J. J., M¸ller, I. M. (2014) The potato tuber mitochondrial proteome. Plant Physiol., 164 (2), 637–653.10.1104/pp.113.229054391209524351685Search in Google Scholar

Sambrook, J., Fritsch, E. F., Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual. 2nd ed. CSHL Press, New York, Cold Spring Harbor. Vols. 1, 2, 3.Search in Google Scholar

Serebriiskii, I. G., Toby, G. G., Finley, R. L., Jr., Golemis, E. A. (2001). Genomic analysis utilizing the yeast two hybrid system. Methods Mol. Biol., 175, 415–454.10.1385/1-59259-235-X:415Search in Google Scholar

Shematorova, E. K., Shpakovski, D. G., Shpakovski, G. V. (2013). Novel complexes of gene expression and their role in the appearance and evolution of the genus Homo [Шематорова, E. K., Шпаковский, Д. Г., Шпаковский, Г. В. Новые комплексы генной экспрессии и их роль в возникновении и эволюции рода Homo]. Tsitologiia, 55 (3), 172–177 (in Russian).Search in Google Scholar

Shematorova, E. K., Slovokhotov, I. Yu., Baranova, E. N., Khaliluev, M. R., Babak, O. G., Klykov, V. N., Shpakovski, D. G., Spivak, S. G., Shpakovski, G. V. (2018). The role of organelles in the functioning of steroid hormonal systems in animals and higher plants [Шематорова, E. K., Словохотов, И. Ю., Баранова, E. Н., Халилуев, М. Р., Бабак, О. Г., Клыков, В. Н., Шпаковский, Д. Г., Спивак, С. Г., Шпаковский, Г. В. Роль органелл в функционировании стероидных гормонльных систем у животных и высших растений;]. [Механизмы регуляции функций органелл эукариотической клетки Proceedings of the International Conference “Mechanisms of regulation of eukaryotic cell organelles functions”], Irkutsk, 22–24 May 2018, pp. 155–157 (in Russian).10.31255/978-5-94797-318-1-155-157Search in Google Scholar

Shematorova, E. K., Slovokhotov, I. Y., Khaliluev, M. R., Berdichevets, I. N., Baranova, E. N., Babak, O. G., Shpakovski, D. G., Spivak, S. G., Shpakovski, G. V. (2014). Mitochondria as a possible place for initial stages of steroid biosynthesis in plants [Шематорова, E. K., Словохотов, И. Ю., Халилуев, М. Р., Бердичевец, И. Н., Баранова, E. Н., Бабак, О. Г., Шпаковский, Д. Г., Спивак, С. Г., Шпаковский, Г. В. Митохондрии как возможное место инициации синтеза стероидных гормонов в растениях]. J. Stress Physiol. Biochem. [Журнал стресс-физиологии и биохимии], 10 (4), 85–97 (in Russian).Search in Google Scholar

Shpakovski, G. V., Spivak, S. G., Berdichevets, I. N., Babak, O. G., Kubrak, S. V., Kilchevsky, A. V., Aralov, A. V., Slovokhotov, I. Yu., Shpakovski, D. G., Baranova, E. N., Khaliluev, M. R., Shematorova, E. K. (2017). A key enzyme of animal steroidogenesis can function in plants enhancing their immunity and accelerating the processes of growth and development. BMC Plant Biology, 17 (Suppl. 1), 120–131.10.1186/s12870-017-1123-2568847629143658Open DOISearch in Google Scholar

Spivak, S. G., Berdichevets, I. N., Litvinovskaya, R. P., Drach, S. V., Kartel, N. A., Shpakovski, G. V. (2010). Some peculiarities of steroid metabolism in transgenic Nicotiana tabacum plants bearing the CYP11A1 cDNA of cytochrome P450scc from the bovine adrenal cortex. Russ. J. Bioorg. Chem., 36 (2), 224–232.10.1134/S1068162010020123Search in Google Scholar

Spivak, S. G., Berdichevets, I. N., Yarmolinsky, D. G., Maneshina, T. V., Shpakovski, G. V., Kartel, N. A. (2009). Construction and characteristics of transgenic tobacco Nicotiana tabacum L. plants expressing CYP11A1 cDNA encoding cytochrome P450scc. Russ. J. Genet., 45 (9), 1067–1073.10.1134/S1022795409090075Search in Google Scholar

Takenaka, M., Zehrmann, A., Verbitskiy, D., Kugelmann, M., Härtel, B., Brennicke, A. (2012). Multiple organellar RNA editing factor (MORF) family proteins are required for RNA editing in mitochondria and plastids of plants. Proc. Natl. Acad. Sci. USA, 109 (13), 5104–5109.10.1073/pnas.1202452109332400222411807Search in Google Scholar

Takenaka, M., Zehrmann, A., Verbitskiy, D., Härtel, B., Brennicke, A. (2013). RNA editing in plants and its evolution. Annu. Rev. Genet., 47, 335–352.10.1146/annurev-genet-111212-13351924274753Open DOISearch in Google Scholar

Takubo, K., Morikawa, T., Nonaka, Y., Mizutani, M., Takenaka, S., Takabe, K., Takahashi, M. A., Ohta, D. (2003). Identification and molecular characterization of mitochondrial ferredoxins and ferredoxin reductase from Arabidopsis. Plant Mol. Biol.,52 (4), 817–830.10.1023/A:1025015811141Open DOISearch in Google Scholar

Woodson, J. D., Perez-Ruiz, J. M., Chory, J. (2011). Heme synthesis by plastid ferrochelatase I regulates nuclear gene expression in plants. Curr. Biol., 21 (10), 897–903.2156550210.1016/j.cub.2011.04.004488685721565502Search in Google Scholar

Zhu, Y. Y., Machleder, E. M., Chenchik, A., Li, R., Siebert, P. D. (2001). Reverse transcriptase template switching: A SMART approach for full-length cDNA library construction. Biotechniques, 30 (4), 892–897.1131427210.2144/01304pf0211314272Search in Google Scholar

eISSN:
1407-009X
Language:
English
Publication timeframe:
6 times per year
Journal Subjects:
General Interest, Mathematics, General Mathematics