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Short note: Development, characterization and cross-amplification of eight EST-derived microsatellites in Salix


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BARKER, J. H. A., A. PAHLICH, S. TRYBUSH, K. J. EDWARDS and A. KARP (2003): Microsatellite markers for diverse Salix species. Mol Ecol Notes 3: 4-6.10.1046/j.1471-8286.2003.00332.xSearch in Google Scholar

DENG, Y. Y., L. A. XU, B. ZHANG, Q. ZHUGE, M. R. HUANG and M. X. WANG (2008): Development of genomic based microsatellites from Salix caprea and SSR polymorphic loci identification in Salix species. Mol Plant Breed 1: 89-94.Search in Google Scholar

DIERINGER, D. and C. SCHLÖTTERER (2003): Microsatellite analyzer (MSA): a platform independent analysis tool for large microsatellite data sets. Mol Ecol Notes 3: 167-169.10.1046/j.1471-8286.2003.00351.xSearch in Google Scholar

ELLIS, J. R. and J. M. BURKE (2007): EST-SSRs as a resource for population genetic analyses. Heredity 99: 125-132.10.1038/sj.hdy.6801001Search in Google Scholar

HOSHIKAWA, T., S. KIKUCHI, T. NAGAMITSU and N. TOMARU (2009): Eighteen microsatellite loci in Salix arbutifolia (Salicaceae) and cross-species amplification in Salix and Populus species. Mol Ecol Resour 9: 1202-120510.1111/j.1755-0998.2009.02607.xSearch in Google Scholar

KIKUCHI, S., W. SUZUKI, N. BAN, A. KANAZASHI and H. YOSHIMARU (2005): Characterization of eight polymorphic microsatellites in endangered willow Salix hukaoana. Mol Ecol Notes 5: 869-870.10.1111/j.1471-8286.2005.01098.xSearch in Google Scholar

KING, R. A., S. L. HARRIS, A. KARP and J. H. A. BARKER (2010): Characterisation and inheritance of nuclear microsatellite loci for use in population studies of the allotetraploid Salix alba - Salix fragilis complex. Tree Genet Genomes 6: 247-258.10.1007/s11295-009-0245-6Search in Google Scholar

LIAN, C., K. NARA, H. NAKAYA, Z. ZHOU, B. WU, N. MIYASHITA and T. HOGETSU (2001): Development of microsatellite markers in polyploid Salix reinii. Mol Ecol Notes 1: 160-161.10.1046/j.1471-8278.2001.00059.xSearch in Google Scholar

POWELL, W., G. C. MACHRAY and J. PROVAN (1996): Polymorphisms revealed by simple sequence repeats. Trends Plant Sci 1: 215-222.10.1016/S1360-1385(96)86898-0Search in Google Scholar

ROZEN, S. and H. J. SKALETSKY (2000): Primer3 on the WWW for general users and for biologist programmers. In: Bioinformatics methods and protocols: methods in molecular biology, eds KRAWETZ, S. and S. MISENER. Humana Press, Totowa, NJ. 365-386.Search in Google Scholar

STAMATI, K., S. BLACKIE, J. W. S. BROWN and J. RUSSELL (2003): A set of polymorphic SSR loci for subarctic willow (Salix lanata, S. lapponum and S. herbacea). Mol Ecol Notes 3: 280-282.10.1046/j.1471-8286.2003.00426.xSearch in Google Scholar

VARSHNEY, R. K., A. GRANER and M. E. SORRELLS (2005): Genic microsatellite markers in plants: features and applications. Trends Biotechnol 23: 48-55.10.1016/j.tibtech.2004.11.00515629858Search in Google Scholar

ZHOU, C. P., X. D. HE, F. G. LI, Q. J. WENG, X. L. YU, Y. WANG, M. LI, J. S. SHI and S. M. GAN (2014): Development of 240 novel EST-SSRs in Eucalyptus L’Herit. Mol Breeding 33: 221-225.10.1007/s11032-013-9923-zSearch in Google Scholar

eISSN:
2509-8934
Language:
English
Publication timeframe:
Volume Open
Journal Subjects:
Life Sciences, Molecular Biology, Genetics, Biotechnology, Plant Science