<abstract xmlns="http://www.w3.org/1999/xhtml"> The main tissue parameters targeted by MR tomography include, among others, relaxation times T1 and T2. This paper focuses on the computation of the relaxation time T2 measured with the Spin Echo method, where the sensing coil of the tomograph provides a multi-echo signal. The maxima of these echoes must be interleaved with an exponential function, and the T2 relaxation can be determined directly from the exponential waveform. As this procedure needs to be repeated for each pixel of the scanned tissue, the processing of large images then becomes very intensive. For example, given the common resolution of 256×256 with 20 slices and five echoes at different times TE, it is necessary to reconstruct 1.3∙106 exponential functions. At present, such computation performed on a regular PC may last even several minutes. This paper introduces the results provided by accelerated computation based on parallelization and carried out with a graphics card. By using the simple method of linear regression, we obtain a processing time of less than 36 ms. Another effective option consists in the Levenberg-Marquardt algorithm, which enables us to reconstruct the same image in 96 ms. This period is at least 900 times shorter than that achievable with professional software. In this context, the paper also comprises an analysis of the results provided by the above-discussed techniques.</abstract>

The main tissue parameters targeted by MR tomography include, among others, relaxation times T1 and T2. This paper focuses on the computation of the relaxation time T2 measured with the Spin Echo method, where the sensing coil of the tomograph provides a multi-echo signal. The maxima of these echoes must be interleaved with an exponential function, and the T2 relaxation can be determined directly from the exponential waveform. As this procedure needs to be repeated for each pixel of the scanned tissue, the processing of large images then becomes very intensive. For example, given the common resolution of 256×256 with 20 slices and five echoes at different times TE, it is necessary to reconstruct 1.3∙106 exponential functions. At present, such computation performed on a regular PC may last even several minutes. This paper introduces the results provided by accelerated computation based on parallelization and carried out with a graphics card. By using the simple method of linear regression, we obtain a processing time of less than 36 ms. Another effective option consists in the Levenberg-Marquardt algorithm, which enables us to reconstruct the same image in 96 ms. This period is at least 900 times shorter than that achievable with professional software. In this context, the paper also comprises an analysis of the results provided by the above-discussed techniques.

GPU-Accelerated Reconstruction of T2 Maps in Magnetic Resonance Imaging

Department of Theoretical and Experimental Electrical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technická 12, 616 00, Brno, Czech Republic

Measurement Science Review

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

{"article-title":"GPU-Accelerated Reconstruction of T2 Maps in Magnetic Resonance Imaging"}

The main tissue parameters targeted by MR tomography include, among others, relaxation times T1 and T2. This paper focuses on the computation of the relaxation...

GPU-Accelerated Reconstruction of T2 Maps in Magnetic Resonance Imaging

Published Online: Aug 27, 2015

Page range: 210 - 218

Received: Jan 22, 2015

Accepted: Aug 12, 2015

DOI: https://doi.org/10.1515/msr-2015-0029

Keywords
CUDA, Spin Echo, T2 relaxation, magnetic resonance imaging

© by Jan Mikulka

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

GPU-Accelerated Reconstruction of T2 Maps in Magnetic Resonance Imaging

Published Online: Aug 27, 2015

Page range: 210 - 218

Received: Jan 22, 2015

Accepted: Aug 12, 2015

DOI: https://doi.org/10.1515/msr-2015-0029

KeywordsCUDA, Spin Echo, T2 relaxation, magnetic resonance imaging

© by Jan Mikulka

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

Keywords
CUDA, Spin Echo, T2 relaxation, magnetic resonance imaging