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The paper presents the strategy for identifying the shape of defects in the domain defined in the boundary value problem modelled by the nonlinear differential equation. To solve the nonlinear problem in the iterative process the PIES method and its advantages were used: the efficient way of the boundary and the domain modelling and global integration. The identification was performed using the genetic algorithm, where in connection with the efficiency of PIES we identify the small number of data required to the defect’s definition. The strategy has been tested for different shapes of defects.