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References ADAMS, M. C., S. E. CELNIKER and R. A. HOLT et al. (2000): The genome sequence of Drosophila melanogaster. Science 287: 2185-2195. AHUJA, M. R. (2001): Recent advances in molecular genetics of forest trees. Euphytica 121: 173-195. AHUJA, M. R. (2005): Polyploidy in gymnosperms: Revisited. Silvae Genet. 54: 59-69. AHUJA, M, R., M. E. DEVEY, A. T. GROVER, K. D. JERMSTAD and D. B. NEALE (1994): Mapped DNA probes from loblolly pine can be used for restriction fragment length polymorphism mapping in other conifers. Theor. Appl. Genet. 88: 279-282. AHUJA, M

;97(4):553-79. 9. Cirillo DM, Miotto P, Tortoli E. Evolution of Phenotypic and Molecular Drug Susceptibility Testing. Adv Exp Med Biol. 2017;1019:221-246. 10. Cole ST, Brosch R, Parkhill J, et al. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature. 1998;393(6685):537-44. 11. Black PA, De vos M, Louw GE, et al. Whole genome sequencing reveals genomic heterogeneity and antibiotic purification in Mycobacterium tuberculosis isolates. BMC Genomics. 2015;16:857. 12. Galagan JE. Genomic insights into tuberculosis. Nat Rev Genet. 2014

, “Christia vespertilionis plant extracts as novel antiproliferative agent against human neuroendocrine tumor cells”, Oncology reports, Vol. 29, No. 6, Pp. 2219-2226, 2013. [6] H. Mat Jusoh, N. Haron, “The total phenolic contents and antioxidant scavenging capacity in free and bound extracts of Christia Vespertilionisis (Daun Rerama)”, International Journal of Allied Health Sciences, Vol. 3, No. 2, Pp. 649-657, 2019. [7] J. Doležel, J.A.N. Bartoš, “Plant DNA flow cytometry and estimation of nuclear genome size”, Annals of botany, Vol. 95, No. 1, Pp. 99-110, 2005. [8] J

References [ABOS15] M. Akgün, A. O. Bayrak, B. Ozer, and M. Ş. Sağgıroğglu. Privacy Preserving Processing of Genomic Data: A Survey. Journal of Biomedical Informatics , 56:103–111, 2015. [ADHT15] E. Ayday, E. De Cristofaro, J.-P. Hubaux, and G. Tsudik. The Chills and Thrills of Whole Genome Sequencing. IEEE Computer , 2015. [AKSX04] R. Agrawal, J. Kiernan, R. Srikant, and Y. Xu. Order Preserving Encryption for Numeric Data. In ACM SIGMOD , pages 563–574, 2004. [AMH + 16] A. Aziz, M. Momin, M. Z. Hasan, N. Mohammed, and D. Alhadidi. Secure and Efficient

ertin and I R usu , Sorting by transpositions is difficult , SIAM J. Discrete Math., 26 (2012) 1148–1180. [5] G. C erbai and L. F errari , Permutation patterns in genome rearrangement problems , In: L. Ferrari, M. Vamvakari (Eds.), Proceedings of the 11th International Conference on Random and Exhaustive Generation of Combinatorial Structures, Athens, Greece, June 18-20, 2018. CEUR Workshop Proceedings, 2113 (2018) 124–131. [6] J. C hristy , J. M c H ugh , M. R iehl and N. W illiams , Distribution of genome rearrangement distance under Double Cut and Join

References ASAMAA, K., A. SOBER and M. RAHI (2001): Leaf anatomical characteristics associated with shoot hydraulic conductance and stomatal sensitivity to changes of leaf water status in temperate deciduous trees. Australian J Pl Physiology 28: 765-774. BALLARD, H. E. and K. J. SYTSMA (2000): Evolution and biogeography of the woody Hawaiian violets (Viola, Violaceae): arctic origins, herbaceous ancestry and bird dispersal. Evolution 54: 1521-1532. BEAULIEU, J. M., I. J. LEITCH, S. PATEL, A. PENDHARKAR and C. A. KNIGHT (2008): Genome size is a strong predictor of

References Alexander LW, Woeste KE (2014) Pyrosequencing of the northern red oak ( Quercus rubra L.) chloroplast genome reveals high quality polymorphisms for population management. Tree Genetics & Genomes 10(4): 803–812. https://doi.org/10.1007/s11295-013-0681-1 Birchenko I, Feng Y, Romero-Severson J (2009) Biogeographical distribution of chloroplast diversity in northern red oak ( Quercus rubra L.). The American Midland Naturalist 161(1): 134–145. https://doi.org/10.1674/0003-0031-161.1.134 Borkowski DS, McCleary T, McAllister M, Romero-Severson J (2014

I. J. LEITCH (2012): Plant DNA C-values Database. http://data.kew.org/cvalues BENNETT, M. D., I. J. LEITCH, H. J. PRICE and J. S. JOHNSTON (2003): Comparison with Caenorhabditis (~100 Mb) and Drosophila (~175 Mb) using flow cytometry show genome size in Arabidopsis to be ~157 Mb and thus ~25% larger than the Arabidopsis Genome Initiative estimate of ~125 Mb. Annals of Botany, 91: 1-11. BENNETZEN, J. L. and E. A. KELLOGG (1997): Do plants have a one-way ticket to genomic obesity? The Plant Cell, 9: 1509-1514. BENNETZEN, J. L., J. MA and K. M. DEVOS (2005

given the importance of this region as a milk producer for Mexico, there is a strong need for new tools that can be used in the control of this disease. Epidemiological investigations are of great value in these circumstances, as authorities rely on a deep understanding of disease dynamics and pathogen diversity in order to develop adequate strategies for the control and eradication of the disease. Seeking to contribute, the present project aimed to determine the frequency of BTb in Altos Sur, as well as M. bovis genetic diversity through spoligotyping and whole-genome

References [1] Breast cancer risk factors - genetics. http://www.breastcancer.org/risk/factors/genetics . [2] Python cryptography toolkit (pycrypto). https://pypi.python.org/pypi/pycrypto . Accessed: 2017-05-18. [3] Research – 23andme. https://www.23andme.com/enint/research/ . [Online; accessed 28-May-2018]. [4] Researchkit. http://researchkit.org/ . [Online; accessed 28-May-2018]. [5] Initial sequencing and analysis of the human genome. Nature , 409(6822):860–921, 02 2001. [6] Gail-Joon Ahn, Moti Yung, and Ninghui Li, editors. ACM CCS 14 , Scottsdale, AZ