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Evolution of Genome Size in Conifers

References ADAMS, M. C., S. E. CELNIKER and R. A. HOLT et al. (2000): The genome sequence of Drosophila melanogaster. Science 287: 2185-2195. AHUJA, M. R. (2001): Recent advances in molecular genetics of forest trees. Euphytica 121: 173-195. AHUJA, M. R. (2005): Polyploidy in gymnosperms: Revisited. Silvae Genet. 54: 59-69. AHUJA, M, R., M. E. DEVEY, A. T. GROVER, K. D. JERMSTAD and D. B. NEALE (1994): Mapped DNA probes from loblolly pine can be used for restriction fragment length polymorphism

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Analysis of absolute nuclear DNA content reveals a small genome and intra-specific variation in Cashew (Anacardium occidentale L.), Anacardiaceae

: targets, trends and tomorrow. Annals of Botany, 107: 467-590. BENNETT, M. D. and I. J. LEITCH (2012): Plant DNA C-values Database. http://data.kew.org/cvalues BENNETT, M. D., I. J. LEITCH, H. J. PRICE and J. S. JOHNSTON (2003): Comparison with Caenorhabditis (~100 Mb) and Drosophila (~175 Mb) using flow cytometry show genome size in Arabidopsis to be ~157 Mb and thus ~25% larger than the Arabidopsis Genome Initiative estimate of ~125 Mb. Annals of Botany, 91: 1-11. BENNETZEN, J. L. and E. A. KELLOGG (1997): Do plants have

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How small and constrained is the genome size of angiosperm woody species

. KNIGHT (2008): Genome size is a strong predictor of cell size and stomatal density in angiosperms New Phytologist 179: 975-986. BEAULIEU, J. M., S. A. SMITH and I. J. LEITCH (2010): On the tempo of genome size evolution in angiosperms. J. Bot. doi: 10.1155/2010/989152. BECK, S. L., R.W. DUNLOP and A. FOSSEY (2003): Evaluation of induced polyploidy in Acacia mearnsii through stomatal counts and guard cell measurements. South African Journal of Botany 69: 563-567. BEDI, Y. S., S. S. BIR and B. S. GILL (1981): Cytopalynology

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Whole-genome draft assembly of Populus tremula x P. alba clone INRA 717-1B4

-Nuñez F, Soolanayakanahally RY, Stanton B, Guy RD, Mansfield SD, Douglas CJ, Cronk QC (2015) Recent Y chromosome divergence despite ancient origin of dioecy in poplars ( Populus ). Mol Ecol 24 (13):3243-3256. http://dx.doi.org/10.1111/mec.13126 Gurevich A, Saveliev V, Vyahhi N, Tesler G (2013) QUAST: quality assessment tool for genome assemblies. Bioinformatics 29 (8):1072-1107. http://dx.doi.org/10.1093/bioinformatics/btt086 Jansson S, Douglas CJ (2007) Populus : A model system for plant biology. Annu Rev Plant Biol 58:435-458. http://dx.doi.org/10

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Integration of EST-CAPS markers into genetic maps of Eucalyptus urophylla and E. tereticornis and their alignment with E. grandis genome sequence

, D. R. BOWATTE, T. J. LAWRENCE, E. H. A. RIKKERINK, S. E. GARDINER and S. S. KORBAN (2008): Development of a set of SNP markers present in expressed genes of the apple. Genomics 92: 353-358. CHO, R. J., M. MINDRINOS, D. R. RICHARDS, R. J. SAPOLSKY, M. ANDERSON, E. DRENKARD, J. DEWDNEY, N. FEDERSPIEL, A. THEOLOGIS, W. H. YANG, E. HUBBELL, M. AU, E. Y. CHUNG, D. LASHKARI, B. Lemieux, C. DEAN, R. J. LIPSHUTZ, F. M. AUSUBEL, R. W. DAVIS and P. J. OEFNER (1999): Genome-wide mapping with biallelic markers in Arabidopsis thaliana. Nat Genet 23: 203

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Construction of a Populus tremuloides Michx. BAC library

-002. CERVERA, M. T., M. M. SEWELL, P. FAIVRE-RAMPANT, V. STORME and W. BOERJAN (2004): Genome mapping in Populus. In: KUMAR, S., FLADUNG, M. (Eds) Molecular Genetics and Breeding of Forest Trees. The Haworth Press, Binghamton, 387-410. CERVERA, M. T., V. STORME, B. IVENS, J. GUSMÃO, B. H. LIU, V. HOSTYN, J. VAN SLYCKEN, M. VAN MONTAGU and W. BOERJAN (2001): Dense genetic linkage maps of three Populus species (Populus deltoides, P. nigra and P. trichocarpa) based on AFLP and microsatellite markers. Genetics 158: 787-809. CLARKE, L. and J

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Development and validation of Acacia koa and A. koaia nuclear SSRs using Illumina sequencing

, Z Zhao, B Li, C Qin, Z Wu, DL Trejo-Saavedra, X Luo, J Cui, RF Rive­ra-Bustamante, S Li and K Hu (2016) A comprehensive characterization of simple sequence repeats in pepper genomes provides valuable resources for marker development in Capsicum. Scientific Reports. 6(1): 1-12. https://doi.org/10.1038/srep18919 Fredua-Agyeman R, D Adamski, RJ Liao, C Morden and D Borthakur (2008) Development and characterization of microsatellite markers for analysis of population differentiation in the tree legume Acacia koa (Fabaceae: Mimo­soideae) in the

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B-Chromosomes in Gymnosperms

of B-chromosomes in Piceaglauca (Moench,) Voss = P. canadensis B. S. P. Citologija 43(8): 809–814 Camacho JPM (2005) B chromosomes In: The Evolution of Genome, Gregory TR (ed.), Elsevier Inc.pp. 223-286. https://doi.org/10.1016/b978-012301463-4/50006-1 Chouhdry AS (1984) Karyomorphological and cytological studies in Ephedra. J. Sci. Hiroshima Univ., Ser. B,. 19: 57–109 Chouhdry SA, Tanaka R (1983) On the occurrence of accessory chromosomes in Ephedra major. Chromosome Inf. Serv. 35: 26–27 Farukshina GG, Putenikhin VP (2004) Karyotype

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1. A genetic linkage map of Pinus massoniana based on SRAP, SSR and ESTP markers

integrating pine genomics. Genetics 159: 799-809. CAI J. and K. JI (2009): Diversity of SSR Markers and strategy of genetic linkage map making with masson’s pine egagametophytes (in Chinese). Molecular Plant Breeding 7: 934-940. doi: 10.3969/mpb.007.000934 CHAGNÉ, D., G. BROWN, C. LALANNE, D. MADUR, D. POT, D. NEALE and C. PLOMION (2003): Comparative genome and QTL mapping between maritime and loblolly pines. Molecular Breeding 12: 185-195. CHAKRAVARTI, A., L. K. LASHER and J. E. REEFER (1991): A maximum likelihood for

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Development and characterization of chloroplast simple sequence repeat markers for Prunus taxa (eleven Japanese native taxa and two foreign taxa)

References Arroyo-García R, Lefort F, de Andrés MT, Ibáñaez J, Borrego J, Jouve N, Cabello F, Martínez-Zapater JM (2002). Chloroplast microsatellite polymorphisms in Vitis species. Genome 45: 1142-1149. https://doi.org/10.1139/g02-087 Goudet J (2001). FSTAT, a program to estimate and test gene diversities and fixa­tion indices (version 2.9.3). Available from http://www2.unil.ch/popgen/softwares/fstat.htm Hamilton MB (1999). Four primer pairs for the amplification of chloroplast inter­genic regions with

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