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Piotr Świątczak, Agnieszka Cydzik-Kwiatkowska and Paulina Rusanowska

consortia, Water Research , 38, pp. 1368–1375. Borrel, G., O’Toole, P.W., Harris, H.M.B., Peyret, P., Brugère, J.F. & Gribaldo, S. (2013). Phylogenomic data support a seventh order of methylotrophic methanogens and provide insights into the evolution of methanogenesis, Genome Biology and Evolution, 5, pp. 1769–1780. Caporaso, J.G., Lauber, C.L., Walters, W.A., Berg-Lyons, D., Huntley, J., Fierer, N., Owens, S.M., Betley, J., Fraser, L., Bauer, M., Gormley, N., Gilbert, J.A., Smith, G. & Knight, R. (2012). Ultra-high-throughput microbial community analysis

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Andrzej Aniszewski

water solute transport with MODFLOW-UZF and T3D, Ground Water , 51, pp. 752–761, DOI: 10.1111/j.1745-6584.2012.01009.x. Chiang, W.-H. (2005). 3D-Groundwater Modeling with PMWIN: A Simulation System for Modeling Groundwater Flow and Trans port Processes , Springer, Verlag, Berlin–Heidelberg–New York 2005. Fang, Y., Wilkins, M.J., Yabusaki, S.B., Lipton, M.S. & Long, P.H.E. (2012). Evaluation of a genome-scale in silico metabolic model for Geobacter metallireducens by using proteomic data from a field biostimulation experiment, Applied and Environmental

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Žaneta Pauková and Zuzana Jureková

. – KOTRLA, M. 2013. Evaluation of dry matter production of Miscanthus sinensis ‘Tatai’ in the condition of South-Western Slovakia. In Acta Regionalia et Environmetalica, vol. 10, 2013, no. 2, pp. 55–58. DOI: 10.2478/aree-2013-0012. RICHARDSON, A.D. – ASHTON, P.M.S. – BERLYN, G.P – Mc GRODY, M.E. – CAMERON, I.R. 2001. Within-crown foliar plasticity of western hemlock, Tsuga heterophylla in relation to stand age. In Annals of Botany, vol. 88, 2001, pp. 1007–1015. RAYBURN, A.L. – Crawford, J. – RAYBURN, CH.M. – JUVIK, J.A. 2009. Genome size of three

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Karol Korzekwa, Iwona Gołaś and Monika Harnisz

Microbiology, 73 , 1952-1960 (2007). [24] Seshadri R., Joseph S.W., Chopra A.K., Sha J., Shaw J., Graf J., Haft D., Wu M., Ren Q., Rosovitz M.J., Madupu R., Tallon L., Kim M., Jin S., Vuong H., Stine O.C., Ali A., Horneman A.J., Heidelberg J.F.: Genome Sequence of Aeromonas hydrophila ATCC 7966T: Jack of all trades , Journal of Bacteriology, 188 , 8272-8282 (2006). [25] Seurinck S., Verstraete W., Sicilliano S.D.: Use of 16S-23S rRNA intergenic spacer region PCR and repetitive extragenic palindromic PCR analyses of Escherichia coli

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Alexis Nzila, Assad Thukair, Saravanan Sankara, Basheer Chanbasha and Musa M. Musa

., Lv, M. & Xu, P. (2012). Genome sequence of the lactate-utilizing Pseudomonas aeruginosa strain XMG, Journal of Bacteriology , 194, 17, pp. 4751–4752. Gao C. Hu C. Ma C. Su F. Yu H. Jiang T. Dou P. Wang Y. Qin T. Lv M. Xu P. 2012 Genome sequence of the lactate-utilizing Pseudomonas aeruginosa strain XMG Journal of Bacteriology 194 17 4751 4752 Green, P.N. (1992). The genus Methylobacterium . In: The Prokaryotes (2nd edn, pp. 2342–2349), Balows, A., Trüper, H.G., Dworkin, M., Harder, W. & Schleifer, K.H. (Eds.), New

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Anna Ząbkiewicz, Magdalena Myga-Nowak, Katarzyna Bandurska, Justyna Paczyńska, Anna Szybecka and Piotr Krupa

., Mavromatis K., Brettin T.S., Bentley S.D., Hothersall J., Stephens E., Thomas Ch. M. Parkhill, J. Levy, S.B., Rainey P.B. & Thomson N.R. (2009). Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens, Genome Biol, 10, 5, R51, doi:10.1186/gb-2009-10-5-r51. [25] Suau A., Bonnet R., Sutren M., Godon J-J., Gibson G.R., Collins M.D. & Dore J. (1999). Direct analysis of genus encoding 16S rRNA from complex communities reveals many novel molecural species within the human gut. Applied and Environmental Microbiology. 65 (11): 4799-4807.

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Vasily Nechaev and Alex Gaponenko

] Retrieved [2013-09-19] from: PCAST (Presidential Commission Calls for More ag Research Funds). 2012. [online] Retrieved [2013-09-19] from: RACHEL BRENCHLEYET et al. 2012. Analysis of the bread wheat genome using wholegenome shotgun sequencing, vol. 491, 2012, NATURE, p. 705-710. RAZZAQ ABDULET et al. 2010. Genetic

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Onyedikachi Ubani, Harrison Ifeanyichukwu Atagana, Mapitsi Silvester Thantsha and Adeleke Rasheed

). Genome sequence of the pattern forming Paenibacillus vortex bacterium reveals potential for thriving in complex environments, BMC Genomics, 11, pp. 710. Sørensen, S.R., Albers, C.N. & Aamand, J. (2008). Rapid mineralisation of the phenylurea herbicide diuron by Variovorax sp. Strain SRS16 in pure culture and within a two-member consortium, Applied and Environmental Microbiology, 74, 8, pp. 2332–2340. Srinivasarao-Naik, B., Mishra, I.M. & Bhattacharya, S.D. (2011). Biodegradation of total petroleum hydrocarbons from oily sludge, Bioremediation Journal

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Marzena Matejczyk and Stanisław Józef Rosochacki

.S. (2011). Draft genome sequence of the polycyclic aromatic hydrocarbon-degrading genetically engineered bioluminescent bioreporter Pseudomonas fl uorescens HK44, Journal of Bacteriology, 193, 18, 5009–5010 (2011). [11] Cheng, V.A. & van Dyk, T.K. (2004). Stress responsive bacteria: biosensors as environmental monitors, Advances in Microbial Physiology, 49, 131–74. [12] Chobtang, J., de Boer, I.J.M., Hoogenboom, R.L.A.P., Haasnoot, W., Kijlstra & Meerburg, A.B.G. (2011). The need and potential of biosensors to detect dioxins and dioxin-like polychlorinated biphenyls

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Agnieszka Ryznar-Luty, Edmund Cibis, Małgorzata Krzywonos and Tadeusz Miśkiewicz

-Mateos, P., Romero-Guzman, F., Duran-Barrantes, M.M. & Barriga-Mateos, F. (2004). Aerobic purication of dairy wastewater in continuous regime. Part I: Analysis of the biodegradation process in two reactor configurations, Biochemical Engineering Journal, 21, 2, pp. 183-191 [4] Caspi, R., Foerster, H., Fulcher, C.A., Kaipa, P., Krummenacker, M., Latendresse, M., Paley, S., Rhee, S.Y., Shearer, A.G., Tissier, C., Walk, T.C., Zhang, P. & Karp, P.D. (2008). The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome